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med9.L mediator complex subunit 9 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734597, updated on 17-Aug-2024

Summary

Official Symbol
med9.L
Official Full Name
mediator complex subunit 9 L homeolog
Primary source
Xenbase:XB-GENE-987613
Locus tag
XELAEV_18045568mg
See related
EnsemblRapid:ENSXLAG00005026432
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
med9
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Genomic context

See med9.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (122189986..122202149)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (111608153..111620262)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene COP9 signalosome subunit 3 L homeolog Neighboring gene 5',3'-nucleotidase, mitochondrial L homeolog Neighboring gene ras related dexamethasone induced 1 L homeolog Neighboring gene phosphatidylethanolamine N-methyltransferase L homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC115580

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mediator of RNA polymerase II transcription subunit 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096072.1NP_001089541.1  mediator of RNA polymerase II transcription subunit 9

    See identical proteins and their annotated locations for NP_001089541.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097840
    UniProtKB/Swiss-Prot
    Q4V7L5
    UniProtKB/TrEMBL
    A0A974C0N3, A0A974C0P2
    Related
    ENSXLAP00005078529.1, ENSXLAT00005080120.1
    Conserved Domains (1) summary
    pfam07544
    Location:33105
    Med9; RNA polymerase II transcription mediator complex subunit 9

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    122189986..122202149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575749.1XP_041431683.1  mediator of RNA polymerase II transcription subunit 9 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LQ37