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tigar.S TP53 induced glycolysis regulatory phosphatase S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734566, updated on 17-Aug-2024

Summary

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Official Symbol
tigar.S
Official Full Name
TP53 induced glycolysis regulatory phosphatase S homeolog
Primary source
Xenbase:XB-GENE-1008476
Locus tag
XELAEV_18019932mg
See related
EnsemblRapid:ENSXLAG00005001011
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tigar; c12orf5
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Genomic context

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Location:
chromosome: 3S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (9672017..9680145)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (9677217..9685345)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108712594 Neighboring gene cyclin D2 S homeolog Neighboring gene fibroblast growth factor 23, gene 2 S homeolog Neighboring gene fibroblast growth factor 23, gene 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115461

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-2,6-bisphosphate 2-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-2,6-bisphosphate 2-phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within autophagy IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in mitochondrial outer membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
fructose-2,6-bisphosphatase TIGAR
Names
TP53-induced glycolysis and apoptosis regulator
probable fructose-2,6-bisphosphatase TIGAR
NP_001089513.1
XP_018109933.1
XP_041443652.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096044.1 → NP_001089513.1  fructose-2,6-bisphosphatase TIGAR

    See identical proteins and their annotated locations for NP_001089513.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097765
    UniProtKB/Swiss-Prot
    Q4V7R0
    UniProtKB/TrEMBL
    A0A974HQ68
    Related
    ENSXLAP00005003084.1, ENSXLAT00005003138.1
    Conserved Domains (1) summary
    pfam00300
    Location:6 → 141
    His_Phos_1; Histidine phosphatase superfamily (branch 1)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    9672017..9680145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018254444.2 → XP_018109933.1  fructose-2,6-bisphosphatase TIGAR isoform X1

    UniProtKB/TrEMBL
    A0A8J0UUV0, A0A974HQ68

  2. XM_041587718.1 → XP_041443652.1  fructose-2,6-bisphosphatase TIGAR isoform X2

    UniProtKB/TrEMBL
    A0A8J1MPI0, A0A974HQ68
    Conserved Domains (1) summary
    smart00855
    Location:2 → 170
    PGAM; Phosphoglycerate mutase family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4V7R0.1 GenPept UniProtKB/Swiss-Prot:Q4V7R0

Gene LinkOut

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