rbm12b.2.L RNA binding motif protein 12B gene 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rbm12b.2.L
Official Full Name: RNA binding motif protein 12B gene 2 L homeolog
Primary source: Xenbase:XB-GENE-5751389
Locus tag: XELAEV_18032188mg
See related: EnsemblRapid:ENSXLAG00005032159
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

Location:: chromosome: 6L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (137585051..137591115)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (128414064..128484027)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: RNA binding motif protein 12B gene 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096013.1 → NP_001089482.1 RNA binding motif protein 12B gene 2 L homeolog

See identical proteins and their annotated locations for NP_001089482.1

Status: PROVISIONAL

Source sequence(s)

BC097695

UniProtKB/TrEMBL

A0A974HGE2, Q4V7W1

Conserved Domains (5) summary

COG0724
Location:243 → 405

RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

cd12510
Location:29 → 102

RRM1_RBM12_like; RNA recognition motif 1 in RNA-binding protein RBM12, RBM12B and similar proteins

cd12511
Location:144 → 216

RRM2_RBM12_like; RNA recognition motif 2 in RNA-binding protein RBM12, RBM12B and similar proteins

cd12513
Location:266 → 346

RRM3_RBM12B; RNA recognition motif 3 in RNA-binding protein 12B (RBM12B) and similar proteins

cl17169
Location:598 → 666

RRM_SF; RNA recognition motif (RRM) superfamily