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MGC114680 uncharacterized protein MGC114680 [ Xenopus laevis (African clawed frog) ]

Gene ID: 734501, updated on 10-Mar-2023

Summary

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Gene symbol
MGC114680
Gene description
uncharacterized protein MGC114680
Locus tag
XELAEV_18046786mg
See related
EnsemblRapid:ENSXLAG00005014622
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC114680 in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (43489241..43529186, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (36802017..36842058, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene forkhead box K2 S homeolog Neighboring gene WD repeat domain 45B S homeolog Neighboring gene potassium channel, two pore domain subfamily K, member 1 S homeolog Neighboring gene fructosamine 3 kinase related protein S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC734501

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095982.1 → NP_001089451.1  uncharacterized protein LOC734501

    See identical proteins and their annotated locations for NP_001089451.1

    Status: PREDICTED

    Source sequence(s)
    BC097548
    UniProtKB/TrEMBL
    A0A974BTM8, Q4V848
    Related
    ENSXLAP00005042859.1, ENSXLAT00005043927.1
    Conserved Domains (3) summary
    cd04121
    Location:9 → 186
    Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
    smart00175
    Location:15 → 177
    RAB; Rab subfamily of small GTPases
    cd03742
    Location:187 → 229
    SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    43489241..43529186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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