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ap1m1.S adaptor related protein complex 1 subunit mu 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734499, updated on 17-Aug-2024

Summary

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Official Symbol
ap1m1.S
Official Full Name
adaptor related protein complex 1 subunit mu 1 S homeolog
Primary source
Xenbase:XB-GENE-1006863
Locus tag
XELAEV_18009734mg
See related
EnsemblRapid:ENSXLAG00005026900
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
Mu1a; ap1m1
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Genomic context

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Location:
chromosome: 1S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (89207336..89227558)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (84013533..84033756)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121399362 Neighboring gene unc-13 homolog A S homeolog Neighboring gene uncharacterized LOC121399363 Neighboring gene UPF1 regulator of nonsense transcripts homolog S homeolog Neighboring gene disintegrin and metalloproteinase domain-containing protein 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein interactomes of protein phosphatase 2A B55 regulatory subunits reveal B55-mediated regulation of replication protein A under replication stress. Wang F, et al. Sci Rep, 2018 Feb 8. PMID 29422626, Free PMC Article
  2. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  3. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC114659

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
adaptor related protein complex 1 subunit mu 1 S homeolog
Names
adaptor related protein complex 1 mu 1 subunit S homeolog
adaptor-related protein complex 1, mu 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095980.1 → NP_001089449.1  adaptor related protein complex 1 subunit mu 1 S homeolog

    See identical proteins and their annotated locations for NP_001089449.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097533
    UniProtKB/TrEMBL
    A0A974DV16, Q4V857
    Related
    ENSXLAP00005080327.1, ENSXLAT00005081920.1
    Conserved Domains (1) summary
    cd09258
    Location:153 → 422
    AP-1_Mu1A_Cterm; C-terminal domain of medium Mu1A subunit in ubiquitously expressed clathrin-associated adaptor protein (AP) complex AP-1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    89207336..89227558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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