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XB5818974.L uncharacterized XB5818974 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734478, updated on 4-Nov-2024

Summary

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Symbol
XB5818974.L
Full Name
uncharacterized XB5818974 L homeolog
Primary source
Xenbase:XB-GENE-5819006
Locus tag
XELAEV_18044922mg
See related
EnsemblRapid:ENSXLAG00005023033 AllianceGenome:Xenbase:XB-GENE-5819006
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
LOC100127872.L
Summary
Predicted to enable folic acid binding activity and transferase activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See XB5818974.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (89170666..89192127, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (78585485..78607196, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene phospholipase C like 1 (inactive) L homeolog Neighboring gene SATB homeobox 2 L homeolog Neighboring gene UPF0565 protein C2orf69-like Neighboring gene matrix AAA peptidase interacting protein 1 L homeolog Neighboring gene tRNA-yW synthesizing protein 5 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115273

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables folic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC734478

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095959.1 → NP_001089428.1  uncharacterized protein LOC734478

    See identical proteins and their annotated locations for NP_001089428.1

    Status: PREDICTED

    Source sequence(s)
    BC094471
    UniProtKB/TrEMBL
    A0A974H473, Q505N5
    Related
    ENSXLAP00005067891.1, ENSXLAT00005069425.1
    Conserved Domains (1) summary
    pfam07837
    Location:13 → 191
    FTCD_N; Formiminotransferase domain, N-terminal subdomain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    89170666..89192127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234576.2 → XP_018090065.1  uncharacterized protein LOC734478 isoform X1

    UniProtKB/TrEMBL
    A0A1L8EWU7, A0A974H3Q7, A0A974H473
    Related
    ENSXLAP00005067932.1, ENSXLAT00005069466.1

  2. XM_018234577.2 → XP_018090066.1  uncharacterized protein LOC734478 isoform X2

    UniProtKB/TrEMBL
    A0A8J0TJW7, A0A974H473
    Related
    ENSXLAP00005067879.1, ENSXLAT00005069413.1

  3. XM_041575744.1 → XP_041431678.1  uncharacterized protein LOC734478 isoform X3

    UniProtKB/TrEMBL
    A0A974H473, Q505N5
    Related
    ENSXLAP00005067866.1, ENSXLAT00005069400.1
    Conserved Domains (1) summary
    pfam07837
    Location:13 → 191
    FTCD_N; Formiminotransferase domain, N-terminal subdomain
Nucleotide Protein Strain
Heading Accession and Version

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