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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001095939.1 → NP_001089408.1 SH3 and multiple ankyrin repeat domains protein 2
See identical proteins and their annotated locations for NP_001089408.1
Status: PROVISIONAL
- Source sequence(s)
-
BC094169
- UniProtKB/Swiss-Prot
-
Q52KW0
- Related
- ENSXLAP00005069349.1, ENSXLAT00005070883.1
- Conserved Domains (3) summary
-
- cd09506
Location:1225 → 1290
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- smart00454
Location:1227 → 1292
- SAM; Sterile alpha motif
- cd00992
Location:54 → 147
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Xenopus_laevis_v10.1 Primary Assembly
Genomic
-
NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly
- Range
-
10760654..11038765 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_041589410.1 → XP_041445344.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X2
- UniProtKB/TrEMBL
- A0A8J1MU33, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1262 → 1389
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1791 → 1856
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589409.1 → XP_041445343.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X1
- UniProtKB/TrEMBL
- A0A8J1MVJ5, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1263 → 1390
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1792 → 1857
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589416.1 → XP_041445350.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X8
- UniProtKB/TrEMBL
- A0A8J1MWH7, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1232 → 1359
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1761 → 1826
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589414.1 → XP_041445348.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X6
- UniProtKB/TrEMBL
- A0A8J1MVK1, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1242 → 1369
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1771 → 1836
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589413.1 → XP_041445347.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X5
- UniProtKB/TrEMBL
- A0A8J1MUB9, A0A974HMX6
- Related
- ENSXLAP00005069530.1, ENSXLAT00005071065.1
- Conserved Domains (7) summary
-
- TIGR00570
Location:1243 → 1370
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1772 → 1837
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589412.1 → XP_041445346.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X4
- UniProtKB/TrEMBL
- A0A8J1MV76, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1250 → 1377
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1779 → 1844
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589411.1 → XP_041445345.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X3
- UniProtKB/TrEMBL
- A0A8J1MWH1, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1257 → 1384
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1786 → 1851
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589420.1 → XP_041445354.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X11
- UniProtKB/TrEMBL
- A0A8J1MU47, A0A974HMX6
- Related
- ENSXLAP00005069630.1, ENSXLAT00005071165.1
- Conserved Domains (7) summary
-
- TIGR00570
Location:1205 → 1332
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1734 → 1799
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589419.1 → XP_041445353.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X10
- UniProtKB/TrEMBL
- A0A8J1MVK8, A0A974HMX6
- Related
- ENSXLAP00005069689.1, ENSXLAT00005071224.1
- Conserved Domains (7) summary
-
- TIGR00570
Location:1219 → 1346
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1748 → 1813
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589417.1 → XP_041445351.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X9
- UniProtKB/TrEMBL
- A0A8J1MV81, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1226 → 1353
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1755 → 1820
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589415.1 → XP_041445349.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X7
- UniProtKB/TrEMBL
- A0A8J1MU42, A0A974HMX6
- Related
- ENSXLAP00005069580.1, ENSXLAT00005071115.1
- Conserved Domains (7) summary
-
- TIGR00570
Location:1236 → 1363
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1765 → 1830
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589421.1 → XP_041445355.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X12
- UniProtKB/TrEMBL
- A0A8J1MWI4, A0A974HMX6
- Related
- ENSXLAP00005069734.1, ENSXLAT00005071269.1
- Conserved Domains (7) summary
-
- TIGR00570
Location:1111 → 1238
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1640 → 1705
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589422.1 → XP_041445356.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X13
- UniProtKB/TrEMBL
- A0A8J1MV87, A0A974HMX6
- Conserved Domains (7) summary
-
- TIGR00570
Location:1237 → 1364
- cdk7; CDK-activating kinase assembly factor MAT1
- PHA02875
Location:167 → 358
- PHA02875; ankyrin repeat protein; Provisional
- cd09506
Location:1766 → 1831
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:520 → 571
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:615 → 708
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00045
Location:229 → 260
- ANK; ANK repeat [structural motif]
- cd17176
Location:54 → 141
- FERM_F0_SHANK2; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
-
XM_041589423.1 → XP_041445357.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X14
- UniProtKB/TrEMBL
-
A0A8J1MUD0
- Conserved Domains (4) summary
-
- TIGR00570
Location:885 → 1012
- cdk7; CDK-activating kinase assembly factor MAT1
- cd09506
Location:1414 → 1479
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:142 → 193
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:237 → 330
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_041589425.1 → XP_041445359.1 SH3 and multiple ankyrin repeat domains protein 2 isoform X15
- UniProtKB/TrEMBL
-
A0A8J1MU52
- Related
- ENSXLAP00005069416.1, ENSXLAT00005070950.1
- Conserved Domains (4) summary
-
- TIGR00570
Location:858 → 985
- cdk7; CDK-activating kinase assembly factor MAT1
- cd09506
Location:1387 → 1452
- SAM_Shank1,2,3; SAM domain of Shank1,2,3 family proteins
- cd11983
Location:142 → 193
- SH3_Shank2; Src homology 3 domain of SH3 and multiple ankyrin repeat domains protein 2
- cd00992
Location:237 → 330
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...