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arl10b.L ADP-ribosylation factor-like 10B L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734453, updated on 4-Nov-2024

Summary

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Official Symbol
arl10b.L
Official Full Name
ADP-ribosylation factor-like 10B L homeolog
Primary source
Xenbase:XB-GENE-947804
Locus tag
XELAEV_18017676mg
See related
EnsemblRapid:ENSXLAG00005035212 AllianceGenome:Xenbase:XB-GENE-947804
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within anterograde axonal transport and protein transport. Predicted to be located in late endosome membrane and lysosomal membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See arl10b.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (76970612..76988763)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (61644180..61662333)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene WASP like actin nucleation promoting factor L homeolog Neighboring gene hyaluronidase 4 L homeolog Neighboring gene transmembrane protein 229A L homeolog Neighboring gene G protein-coupled receptor 37 (endothelin receptor type B-like) L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC114718

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within anterograde axonal transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
  
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
  
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
  
located_in lysosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 8B-A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095934.1 → NP_001089403.1  ADP-ribosylation factor-like protein 8B-A-like

    See identical proteins and their annotated locations for NP_001089403.1

    Status: PROVISIONAL

    Source sequence(s)
    BC094156
    UniProtKB/TrEMBL
    A0A974HT80, Q52KX1
    Related
    ENSXLAP00005105274.1, ENSXLAT00005107322.1
    Conserved Domains (2) summary
    cd04159
    Location:22 → 180
    Arl10_like; Arf-like 9 (Arl9) and 10 (Arl10) GTPases
    pfam00071
    Location:23 → 179
    Ras; Ras family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    76970612..76988763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials