vdac2.S voltage-dependent anion channel 2 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: vdac2.S
Official Full Name: voltage-dependent anion channel 2 S homeolog
Primary source: Xenbase:XB-GENE-954844
Locus tag: XELAEV_18000562mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: vdac2; vdac2.L
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 7S

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7S	NC_054384.1 (44993772..45035443)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016694810.1 (2183691..2224108, complement)

Chromosome 7S - NC_054384.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables porin activity	IEA Inferred from Electronic Annotation more info
enables voltage-gated monoatomic anion channel activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within monoatomic anion transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
part_of pore complex	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: voltage-dependent anion-selective channel protein 2

Names: VDAC-2; outer mitochondrial membrane protein porin; voltage-dependent anion channel 2 L homeolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095930.1 → NP_001089399.1 voltage-dependent anion-selective channel protein 2

See identical proteins and their annotated locations for NP_001089399.1

Status: PROVISIONAL

Source sequence(s)

BC094145

UniProtKB/Swiss-Prot

P81004

UniProtKB/TrEMBL

Q52KY1

Conserved Domains (1) summary

cd07306
Location:4 → 282

Porin3_VDAC; Voltage-dependent anion channel of the outer mitochondrial membrane

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

44993772..45035443

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041570561.1 → XP_041426495.1 voltage-dependent anion-selective channel protein 2 isoform X1

UniProtKB/TrEMBL

A0A8J1LCV9

Conserved Domains (1) summary

cd07306
Location:4 → 184

Porin3_VDAC; Voltage-dependent anion channel of the outer mitochondrial membrane