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selenbp1.L selenium binding protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734446, updated on 17-Aug-2024

Summary

Official Symbol
selenbp1.L
Official Full Name
selenium binding protein 1 L homeolog
Primary source
Xenbase:XB-GENE-959080
Locus tag
XELAEV_18040887mg
See related
EnsemblRapid:ENSXLAG00005002390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
MTO; hsbp; lpsb; sp56; sbp56; selenbp1; selenbp1-a; selenbp1-b
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Genomic context

See selenbp1.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (133755832..133771594)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (118538208..118554139)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene cingulin L homeolog Neighboring gene proteasome subunit beta 4 L homeolog Neighboring gene regulatory factor X5 L homeolog Neighboring gene phosphatidylinositol 4-kinase, catalytic, beta L homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC115145

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables methanethiol oxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables selenium binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
methanethiol oxidase
Names
selenium-binding protein 1-A
NP_001089396.1
XP_041428078.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095927.1NP_001089396.1  methanethiol oxidase

    See identical proteins and their annotated locations for NP_001089396.1

    Status: PROVISIONAL

    Source sequence(s)
    BC094129
    UniProtKB/Swiss-Prot
    Q52KZ7
    UniProtKB/TrEMBL
    A0A974C585, A0A974H9I0
    Related
    ENSXLAP00005007159.1, ENSXLAT00005007268.1
    Conserved Domains (1) summary
    pfam05694
    Location:7472
    SBP56; 56kDa selenium binding protein (SBP56)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    133755832..133771594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041572144.1XP_041428078.1  methanethiol oxidase isoform X1

    UniProtKB/TrEMBL
    A0A8J1LEV1