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znf572.L zinc finger protein 572 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734445, updated on 4-Nov-2024

Summary

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Official Symbol
znf572.L
Official Full Name
zinc finger protein 572 L homeolog
Primary source
Xenbase:XB-GENE-5881598
Locus tag
XELAEV_18004576mg
See related
EnsemblRapid:ENSXLAG00005021248 AllianceGenome:Xenbase:XB-GENE-5881598
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
znf572
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Genomic context

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See znf572.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (171114092..171124586, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694879.1 (279742..290210)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 3-like, zinc finger protein 282-like L homeolog Neighboring gene glutamine rich 1 like 2 Kruppel-associated box containing [provisional] L homeolog Neighboring gene zinc finger protein 71 L homeolog Neighboring gene zinc finger protein 84 like L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115356

General protein information

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Preferred Names
zinc finger protein 572 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095926.1 → NP_001089395.1  zinc finger protein 572 L homeolog

    See identical proteins and their annotated locations for NP_001089395.1

    Status: PROVISIONAL

    Source sequence(s)
    BC094128
    UniProtKB/TrEMBL
    A0A8J0Q3V9, A0A974GZL1, A0AA97PYU8, Q52KZ8
    Related
    ENSXLAP00005062324.1, ENSXLAT00005063777.1
    Conserved Domains (6) summary
    cd07765
    Location:16 → 55
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:16 → 73
    KRAB; krueppel associated box
    COG5048
    Location:417 → 473
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:365 → 385
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:335 → 357
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:405 → 429
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    171114092..171124586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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