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mgat2l.L alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase like L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734412, updated on 4-Nov-2024

Summary

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Official Symbol
mgat2l.L
Official Full Name
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase like L homeolog
Primary source
Xenbase:XB-GENE-22169455
Locus tag
XELAEV_18026378mg
See related
EnsemblRapid:ENSXLAG00005031619 AllianceGenome:Xenbase:XB-GENE-22169455
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
XB22169453; XB22169453.L; LOC100493854.L
Summary
Predicted to enable alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity and metal ion binding activity. Predicted to act upstream of or within oligosaccharide biosynthetic process and protein N-linked glycosylation. Predicted to be located in Golgi membrane and Golgi stack. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mgat2l.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (23526837..23533445, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (22755000..22761577, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108716526 Neighboring gene N-acetylglucosaminidase, alpha L homeolog Neighboring gene ring finger protein 8, E3 ubiquitin protein ligase L homeolog Neighboring gene uncharacterized LOC108716529

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC98819

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC734412

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095893.1 → NP_001089362.1  uncharacterized protein LOC734412

    See identical proteins and their annotated locations for NP_001089362.1

    Status: PREDICTED

    Source sequence(s)
    BC093489
    UniProtKB/TrEMBL
    A0A974CW22, Q566K5, Q6DFF0
    Related
    ENSXLAP00005094756.1, ENSXLAT00005096458.1
    Conserved Domains (1) summary
    pfam05060
    Location:62 → 415
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    23526837..23533445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials