U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

schip1.S schwannomin interacting protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734392, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
schip1.S
Official Full Name
schwannomin interacting protein 1 S homeolog
Primary source
Xenbase:XB-GENE-1011071
Locus tag
XELAEV_18029747mg
See related
EnsemblRapid:ENSXLAG00005003204
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
schip1; Sec22L1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5S
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (102532333..102744505, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (95763256..95914732, complement)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes protein 4-like Neighboring gene chromosome 5 C3orf80 homolog S homeolog Neighboring gene uncharacterized LOC121394308 Neighboring gene protein ALP1-like Neighboring gene major facilitator superfamily domain containing 1 S homeolog Neighboring gene retinoic acid receptor responder (tazarotene induced) 1 S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC115049

General protein information

Go to the top of the page Help
Preferred Names
schwannomin interacting protein 1 S homeolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095873.1 → NP_001089342.1  schwannomin interacting protein 1 S homeolog

    See identical proteins and their annotated locations for NP_001089342.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092156
    UniProtKB/TrEMBL
    Q56A60
    Related
    ENSXLAP00005009522.1, ENSXLAT00005009670.1
    Conserved Domains (1) summary
    pfam10148
    Location:12 → 238
    SCHIP-1; Schwannomin-interacting protein 1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    102532333..102744505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018264559.2 → XP_018120048.2  schwannomin interacting protein 1 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0VDZ1
    Related
    ENSXLAP00005009562.1, ENSXLAT00005009710.1

  2. XM_018264561.2 → XP_018120050.1  schwannomin interacting protein 1 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0VDL5
    Related
    ENSXLAP00005009544.1, ENSXLAT00005009692.1

  3. XM_018264562.2 → XP_018120051.1  schwannomin interacting protein 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8G4A2, A0A974HHV9
    Related
    ENSXLAP00005009518.1, ENSXLAT00005009666.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.