U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MGC146443.L uncharacterized protein MGC146443 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734386, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
MGC146443.L
Official Full Name
uncharacterized protein MGC146443 L homeolog
Primary source
Xenbase:XB-GENE-6487975
See related
EnsemblRapid:ENSXLAG00005017547
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (122730981..122740247, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (116037982..116047378, complement)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 12 S homeolog Neighboring gene acireductone dioxygenase 1 S homeolog Neighboring gene ribonuclease H1 S homeolog Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene ribosomal protein S7 S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC115038

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC734386

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095867.1 → NP_001089336.1  uncharacterized protein LOC734386

    See identical proteins and their annotated locations for NP_001089336.1

    Status: PREDICTED

    Source sequence(s)
    BC092118
    UniProtKB/TrEMBL
    Q58E11
    Related
    ENSXLAP00005051781.1, ENSXLAT00005052944.1
    Conserved Domains (2) summary
    cd09280
    Location:63 → 202
    RNase_HI_eukaryote_like; Eukaryotic RNase H is essential and is longer and more complex than their prokaryotic counterparts
    pfam01693
    Location:3 → 44
    Cauli_VI; Caulimovirus viroplasmin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    122730981..122740247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials