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scaper.L S-phase cyclin A-associated protein in the ER L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734379, updated on 17-Aug-2024

Summary

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Official Symbol
scaper.L
Official Full Name
S-phase cyclin A-associated protein in the ER L homeolog
Primary source
Xenbase:XB-GENE-5953702
Locus tag
XELAEV_18017973mg
See related
EnsemblRapid:ENSXLAG00005036044
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
scaper
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 3L
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (96048366..96135519, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (80733221..80820587, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene electron transfer flavoprotein subunit alpha L homeolog Neighboring gene ISL LIM homeobox 2 L homeolog Neighboring gene proline-serine-threonine phosphatase interacting protein 1 L homeolog Neighboring gene uncharacterized LOC121401532 Neighboring gene tetraspanin 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC85007

General protein information

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Preferred Names
S-phase cyclin A-associated protein in the ER L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095860.1 → NP_001089329.1  S-phase cyclin A-associated protein in the ER L homeolog

    See identical proteins and their annotated locations for NP_001089329.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092036
    UniProtKB/TrEMBL
    Q58E79
    Related
    ENSXLAP00005107736.1, ENSXLAT00005109882.1
    Conserved Domains (1) summary
    pfam16501
    Location:1 → 48
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    96048366..96135519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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