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depdc7.S DEP domain containing 7 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734375, updated on 17-Aug-2024

Summary

Official Symbol
depdc7.S
Official Full Name
DEP domain containing 7 S homeolog
Primary source
Xenbase:XB-GENE-6251452
Locus tag
XELAEV_18024414mg
See related
EnsemblRapid:ENSXLAG00005021091
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tr2; depdc7b; depdc7-a; depdc7-b
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See depdc7.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (10534746..10550449)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (10377138..10392829)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene proline rich and Gla domain 4 S homeolog Neighboring gene glutamine and serine rich 1 S homeolog Neighboring gene t-complex 11, testis-specific-like 1 S homeolog Neighboring gene homeodomain interacting protein kinase 3 S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
DEP domain containing 7 S homeolog
Names
DEP domain containing 7 b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095856.1NP_001089325.1  DEP domain containing 7 S homeolog

    See identical proteins and their annotated locations for NP_001089325.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092031
    UniProtKB/TrEMBL
    A0A974CYW4, Q58E84
    Related
    ENSXLAP00005061970.1, ENSXLAT00005063424.1
    Conserved Domains (2) summary
    cd04405
    Location:110344
    RhoGAP_BRCC3-like; RhoGAP_BRCC3-like: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain ...
    cl02442
    Location:148
    DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    10534746..10550449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)