fundc1.S FUN14 domain containing 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: fundc1.S
Official Full Name: FUN14 domain containing 1 S homeolog
Primary source: Xenbase:XB-GENE-964326
Locus tag: XELAEV_18014727mg
See related: EnsemblRapid:ENSXLAG00005025746 AllianceGenome:Xenbase:XB-GENE-964326
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: fundc1; fundc1-a; fundc1.L
Summary: Predicted to act upstream of or within autophagy of mitochondrion and response to hypoxia. Predicted to be located in mitochondrial outer membrane. Orthologous to human FUNDC1 (FUN14 domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2S

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (47935314..47943443)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (45094170..45102365)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within autophagy	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within autophagy of mitochondrion	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within autophagy of mitochondrion	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within response to hypoxia	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	ISS Inferred from Sequence or Structural Similarity more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: FUN14 domain-containing protein 1A

Names: FUN14 domain containing 1 L homeolog; FUN14 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.