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pttg1ip.L pituitary tumor-transforming 1 interacting protein, gene 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734288, updated on 4-Nov-2024

Summary

Official Symbol
pttg1ip.L
Official Full Name
pituitary tumor-transforming 1 interacting protein, gene 1 L homeolog
Primary source
Xenbase:XB-GENE-954069
Locus tag
XELAEV_18044887mg
See related
AllianceGenome:Xenbase:XB-GENE-954069
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pttg1ip; pttg1ip.1; pttg1ip.1.L
Summary
Predicted to act upstream of or within protein import into nucleus. Predicted to be located in cytoplasm; membrane; and nucleus. Orthologous to human PTTG1IP (PTTG1 interacting protein). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See pttg1ip.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (87116202..87127353)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (76626843..76637994)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene SLX9 ribosome biogenesis factor L homeolog Neighboring gene integrin subunit beta 2 L homeolog Neighboring gene small ubiquitin like modifier 3 L homeolog Neighboring gene small ubiquitin-related modifier 3

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC85116

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
pituitary tumor-transforming 1 interacting protein, gene 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095772.1NP_001089241.1  pituitary tumor-transforming 1 interacting protein, gene 1 L homeolog precursor

    See identical proteins and their annotated locations for NP_001089241.1

    Status: PROVISIONAL

    Source sequence(s)
    BC089263
    UniProtKB/TrEMBL
    A0A974BZK0, Q5FWP1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    87116202..87127353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)