spsb4.L splA/ryanodine receptor domain and SOCS box containing 4 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: spsb4.L
Official Full Name: splA/ryanodine receptor domain and SOCS box containing 4 L homeolog
Primary source: Xenbase:XB-GENE-963319
Locus tag: XELAEV_18027768mg
See related: EnsemblRapid:ENSXLAG00005017088
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ssb4; spsb4; ssb-4
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 5L

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (132163240..132254069)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (121412278..121503514)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular signal transduction	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein ubiquitination	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: splA/ryanodine receptor domain and SOCS box containing 4 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095770.1 → NP_001089239.1 splA/ryanodine receptor domain and SOCS box containing 4 L homeolog

See identical proteins and their annotated locations for NP_001089239.1

Status: PROVISIONAL

Source sequence(s)

BC089259

UniProtKB/TrEMBL

A0A974HKJ8, Q5FWP5

Related

ENSXLAP00005050412.1, ENSXLAT00005051553.1

Conserved Domains (2) summary

cd03743
Location:232 → 273

SOCS_SSB4; SOCS (suppressors of cytokine signaling) box of SSB4 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB4 has been shown to bind to MET, the receptor protein-tyrosine kinase for ...

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)