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pmel.L premelanosome protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734169, updated on 4-Nov-2024

Summary

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Official Symbol
pmel.L
Official Full Name
premelanosome protein L homeolog
Primary source
Xenbase:XB-GENE-6253468
Locus tag
XELAEV_18013378mg
See related
EnsemblRapid:ENSXLAG00005007824 AllianceGenome:Xenbase:XB-GENE-6253468
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sil; me20; pmel; silv; gp100; pmel-a; pmel-b; pmel17; silver
Summary
Orthologous to human PMEL (premelanosome protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pmel.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (144783204..144791695)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (138907386..138915920)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene RAB5B, member RAS oncogene family L homeolog Neighboring gene cyclin-dependent kinase 2 L homeolog Neighboring gene diacylglycerol kinase alpha L homeolog Neighboring gene poly(A) specific ribonuclease subunit PAN2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
melanocyte protein PMEL
Names
silver homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    144783204..144791695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018247403.2 → XP_018102892.2  melanocyte protein PMEL isoform X1

    UniProtKB/TrEMBL
    A0A8J0UGM7, A0A974HZD8
    Related
    ENSXLAP00005022340.1, ENSXLAT00005023032.1
    Conserved Domains (3) summary
    PTZ00436
    Location:380 → 511
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    TIGR00864
    Location:257 → 417
    PCC; polycystin cation channel protein
    PRK10811
    Location:520 → 671
    rne; ribonuclease E; Reviewed

  2. XM_041582511.1 → XP_041438445.1  melanocyte protein PMEL isoform X2

    UniProtKB/TrEMBL
    A0A8J1MBJ1, A0A974HZD8
    Related
    ENSXLAP00005022348.1, ENSXLAT00005023040.1
    Conserved Domains (3) summary
    PTZ00436
    Location:380 → 504
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    TIGR00864
    Location:257 → 417
    PCC; polycystin cation channel protein
    PRK10811
    Location:513 → 664
    rne; ribonuclease E; Reviewed
Nucleotide Protein Strain
Heading Accession and Version

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