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ankrd28 ankyrin repeat domain 28 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 734050, updated on 4-Nov-2024

Summary

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Official Symbol
ankrd28provided by Xenbase
Official Full Name
ankyrin repeat domain 28provided by Xenbase
Primary source
Xenbase:XB-GENE-5857499
See related
Ensembl:ENSXETG00000008989 AllianceGenome:Xenbase:XB-GENE-5857499
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
pitk; pp6-ars-a
Summary
Orthologous to human ANKRD28 (ankyrin repeat domain 28). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See ankrd28 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
30
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (43850209..43932056, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (80218566..80300287)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene uncharacterized LOC105947683 Neighboring gene biotinidase Neighboring gene uncharacterized LOC116411719 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    43850209..43932056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904540.1 → XP_031760400.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X2

    UniProtKB/TrEMBL
    F7B605
    Related
    ENSXETP00000019702.5, ENSXETT00000019702.5
    Conserved Domains (3) summary
    PHA03095
    Location:22 → 310
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:140 → 170
    ANK; ANK repeat [structural motif]
    cl39094
    Location:389 → 624
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_031904539.1 → XP_031760399.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1

    UniProtKB/TrEMBL
    A0A6I8SIZ8
    Related
    ENSXETP00000092221.2, ENSXETT00000074826.2
    Conserved Domains (3) summary
    PHA03095
    Location:49 → 337
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:167 → 197
    ANK; ANK repeat [structural motif]
    cl39094
    Location:416 → 651
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_012965566.3 → XP_012821020.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X3

    UniProtKB/TrEMBL
    A0A6I8SBP3
    Related
    ENSXETP00000094382.1, ENSXETT00000089586.2
    Conserved Domains (5) summary
    PHA02874
    Location:581 → 890
    PHA02874; ankyrin repeat protein; Provisional
    PHA03095
    Location:49 → 337
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:167 → 197
    ANK; ANK repeat [structural motif]
    pfam00023
    Location:954 → 984
    Ank; Ankyrin repeat
    pfam12796
    Location:854 → 947
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein Strain
Heading Accession and Version

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