znf585b zinc finger protein 585B [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: znf585bprovided by Xenbase
Official Full Name: zinc finger protein 585Bprovided by Xenbase
Primary source: Xenbase:XB-GENE-6459801
See related: AllianceGenome:Xenbase:XB-GENE-6459801
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: xfdl156; znf585b-a; znf585b-b
Summary: Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 6

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	6	NC_030682.2 (3557067..3563368)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	Unplaced Scaffold	NW_016683397.1 (677861..683672, complement)

Chromosome 6 - NC_030682.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger protein 585B

Names: XFDL 156; novel zinc finger protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045629.1 → NP_001039094.1 zinc finger protein 585B

See identical proteins and their annotated locations for NP_001039094.1

Status: PROVISIONAL

Source sequence(s)

CR942361

UniProtKB/TrEMBL

Q28CA8

Conserved Domains (3) summary

COG5048
Location:274 → 334

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:250 → 270

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam13465
Location:318 → 341

zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

3557067..3563368

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031903421.1 → XP_031759281.1 zinc finger protein 585B isoform X2

UniProtKB/TrEMBL

A0A8J1JRS5

Conserved Domains (2) summary

COG5048
Location:109 → 445

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:221 → 241

ZF_C2H2; C2H2 Zn finger [structural motif]
XM_031903420.1 → XP_031759280.1 zinc finger protein 585B isoform X1

UniProtKB/TrEMBL

A0A8J1JQH1

Conserved Domains (2) summary

COG5048
Location:138 → 474

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:250 → 270

ZF_C2H2; C2H2 Zn finger [structural motif]