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LOC732611 triose phosphate/phosphate translocator, chloroplastic [ Glycine max (soybean) ]

Gene ID: 732611, updated on 7-Dec-2023

Summary

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Gene symbol
LOC732611
Gene description
triose phosphate/phosphate translocator, chloroplastic
Locus tag
GLYMA_13G175100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC732611 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (28390796..28396543)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (28970023..28975772)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene receptor-like protein kinase HSL1-like Neighboring gene protein DMP4 Neighboring gene homeobox-DDT domain protein RLT1 Neighboring gene protein E6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gradients of lipid storage, photosynthesis and plastid differentiation in developing soybean seeds. Borisjuk L, et al. New Phytol, 2005 Sep. PMID 16101913
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triose phosphate/phosphate translocator, chloroplastic
Names
plastid triose phophate translocator-like
putative plastid triose phophate translocator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    28390796..28396543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003542673.4 → XP_003542721.1  triose phosphate/phosphate translocator, chloroplastic

    UniProtKB/TrEMBL
    I1M068
    Conserved Domains (1) summary
    TIGR00817
    Location:102 → 400
    tpt; Tpt phosphate/phosphoenolpyruvate translocator
Nucleotide Protein
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