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LOC732579 dehydration-responsive element binding protein 2 [ Glycine max (soybean) ]

Gene ID: 732579, updated on 7-Dec-2023

Summary

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Gene symbol
LOC732579
Gene description
dehydration-responsive element binding protein 2
Locus tag
GLYMA_06G042100v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
DREB2; GmERF023
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Genomic context

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See LOC732579 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (3165231..3166363, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (3179179..3180311, complement)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein 8 Neighboring gene WUSCHEL-related homeobox 4-like Neighboring gene elongation of fatty acids protein 3-like Neighboring gene uncharacterized LOC100785312 Neighboring gene kinesin-like protein KIN-4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GmDREB2, a soybean DRE-binding transcription factor, conferred drought and high-salt tolerance in transgenic plants. Chen M, et al. Biochem Biophys Res Commun, 2007 Feb 9. PMID 17178106
  2. Phylogeny, gene structures, and expression patterns of the ERF gene family in soybean (Glycine max L.). Zhang G, et al. J Exp Bot, 2008. PMID 18832187, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dehydration-responsive element binding protein 2
Names
AP2-EREBP transcription factor
DREB protein
DREB2 factor
drought responsive element binding protein 2
transcription factor DREB2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250325.2 → NP_001237254.2  dehydration-responsive element binding protein 2

    Status: VALIDATED

    Source sequence(s)
    ACUP04001960, AK244651
    UniProtKB/TrEMBL
    C5IU97, Q1AND5, Q2VEU4
    Conserved Domains (1) summary
    smart00380
    Location:34 → 93
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    3165231..3166363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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