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Mir9b microRNA mir-9b [ Apis mellifera (honey bee) ]

Gene ID: 732513, updated on 22-Apr-2023

Summary

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Gene symbol
Mir9b
Gene description
microRNA mir-9b
See related
miRBase:MI0001597
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
Mirn9b; ame-mir-9b
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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See Mir9b in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
1
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG15 NC_037652.1 (7426936..7427027, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG15 NC_007084.3 (7887633..7887724, complement)

Linkage Group LG15 - NC_037652.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3a subunit 3 noi Neighboring gene serine/threonine-protein kinase grp Neighboring gene microRNA mir-306 Neighboring gene microRNA mir-79 Neighboring gene uncharacterized LOC113219269 Neighboring gene metal transporter uex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee. Behura SK, et al. Insect Mol Biol, 2010 Aug. PMID 20491979
  2. Computational and transcriptional evidence for microRNAs in the honey bee genome. Weaver DB, et al. Genome Biol, 2007. PMID 17543122, Free PMC Article
  3. MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.). Macedo LM, et al. Insect Mol Biol, 2016 Jun. PMID 26853694
  4. Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome. Greenberg JK, et al. Genes Brain Behav, 2012 Aug. PMID 22409512, Free PMC Article
  5. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • microRNA 9b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_031530.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    QIUM02000064

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037652.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    7426936..7427027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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Research Materials