Slc25a42 solute carrier family 25, member 42 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Slc25a42provided by MGI
Official Full Name: solute carrier family 25, member 42provided by MGI
Primary source: MGI:MGI:1920345
See related: Ensembl:ENSMUSG00000002346 AllianceGenome:MGI:1920345
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 2900084M01Rik
Summary: Predicted to enable ADP phosphatase activity; nucleobase-containing compound transmembrane transporter activity; and secondary active transmembrane transporter activity. Predicted to be involved in coenzyme A biosynthetic process and nucleobase-containing compound transport. Located in mitochondrial inner membrane. Orthologous to human SLC25A42 (solute carrier family 25 member 42). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Ubiquitous expression in kidney adult (RPKM 45.9), liver adult (RPKM 40.3) and 26 other tissues See more
Orthologs: human all
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Genomic context

Location:: 8 B3.3; 8 34.15 cM

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	8	NC_000074.7 (70636990..70664931, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	8	NC_000074.6 (70184340..70212281, complement)

Chromosome 8 - NC_000074.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Slc25a42 (e-PCR), detects polymorphism
- UniSTS:547058

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables ADP phosphatase activity	ISO Inferred from Sequence Orthology more info
enables ADP phosphatase activity	ISS Inferred from Sequence or Structural Similarity more info
enables ADP transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables ADP transmembrane transporter activity	ISS Inferred from Sequence or Structural Similarity more info
enables AMP transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables AMP transmembrane transporter activity	ISS Inferred from Sequence or Structural Similarity more info
enables ATP transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables ATP transmembrane transporter activity	ISS Inferred from Sequence or Structural Similarity more info
enables coenzyme A transmembrane transporter activity	ISO Inferred from Sequence Orthology more info
enables coenzyme A transmembrane transporter activity	ISS Inferred from Sequence or Structural Similarity more info
enables secondary active transmembrane transporter activity	ISO Inferred from Sequence Orthology more info	PubMed

Process	Evidence Code	Pubs
involved_in ADP transport	ISO Inferred from Sequence Orthology more info
involved_in ADP transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in AMP transport	ISO Inferred from Sequence Orthology more info
involved_in AMP transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in ATP transport	ISO Inferred from Sequence Orthology more info
involved_in ATP transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in coenzyme A biosynthetic process	ISO Inferred from Sequence Orthology more info	PubMed
involved_in coenzyme A transmembrane transport	ISO Inferred from Sequence Orthology more info
involved_in coenzyme A transmembrane transport	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	HDA more info	PubMed
is_active_in mitochondrial inner membrane	ISO Inferred from Sequence Orthology more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in mitochondrion	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: mitochondrial coenzyme A transporter SLC25A42

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.