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MEIS1-AS3 MEIS1 antisense RNA 3 [ Homo sapiens (human) ]

Gene ID: 730198, updated on 10-Oct-2023

Summary

Official Symbol
MEIS1-AS3provided by HGNC
Official Full Name
MEIS1 antisense RNA 3provided by HGNC
Primary source
HGNC:HGNC:40369
See related
AllianceGenome:HGNC:40369
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
2p14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (66423342..66433470, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (66432106..66442550, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (66650474..66660602, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene microRNA 4778 Neighboring gene E4 enhancer upstream of MEIS1 Neighboring gene Sharpr-MPRA regulatory region 4056 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66617956-66618568 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66618569-66619179 Neighboring gene long intergenic non-protein coding RNA 1873 Neighboring gene MEIS1 5' regulatory region Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:66666573-66667772 Neighboring gene HHc2:066588 enhancer in MEIS1 Neighboring gene E2 enhancer in MEIS1 Neighboring gene MEIS1 antisense RNA 2 Neighboring gene Meis homeobox 1 Neighboring gene E5 enhancer in MEIS1 Neighboring gene HHc2:066628 enhancer in MEIS1 Neighboring gene E7 enhancer in MEIS1 Neighboring gene HCNR606 enhancer in MEIS1 Neighboring gene uncharacterized LOC124900511 Neighboring gene HCNR617 enhancer in MEIS1 Neighboring gene HHc2:066650 enhancer in MEIS1 Neighboring gene HHc2:066659 enhancer in MEIS1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • MEIS1 antisense RNA 3 (non-protein coding)

Clone Names

  • AC092669.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046438.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092669, CF891067, DA226783, DA702499, DA708779, DA735371, KF456673

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    66423342..66433470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    66432106..66442550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)