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EEF1A1P48 eukaryotic translation elongation factor 1 alpha 1 pseudogene 48 [ Homo sapiens (human) ]

Gene ID: 729856, updated on 28-Oct-2024

Summary

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Official Symbol
EEF1A1P48provided by HGNC
Official Full Name
eukaryotic translation elongation factor 1 alpha 1 pseudogene 48provided by HGNC
Primary source
HGNC:HGNC:56205
See related
AllianceGenome:HGNC:56205
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See EEF1A1P48 in Genome Data Viewer
Location:
1p36.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (23670777..23671244)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (23505701..23506168)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (23997267..23997734)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984928 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:23918734-23919933 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:23919962-23920732 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 369 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:23923279-23924076 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:23924875-23925672 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:23925673-23926470 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:23926471-23927268 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 370 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 371 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23945502-23946002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23946003-23946503 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 372 Neighboring gene myelodysplastic syndrome 2 translocation associated Neighboring gene ATAC-STARR-seq lymphoblastoid active region 373 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 374 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:24024040-24024661 Neighboring gene ribosomal protein L11 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 376 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 419 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 420 Neighboring gene elongin A Neighboring gene ELOA antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029193.1 

    Range
    101..568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    23670777..23671244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    23505701..23506168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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