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TGFB2-AS1 TGFB2 antisense RNA 1 (head to head) [ Homo sapiens (human) ]

Gene ID: 728463, updated on 10-Oct-2023

Summary

Official Symbol
TGFB2-AS1provided by HGNC
Official Full Name
TGFB2 antisense RNA 1 (head to head)provided by HGNC
Primary source
HGNC:HGNC:50628
See related
AllianceGenome:HGNC:50628
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lung (RPKM 1.2), prostate (RPKM 1.2) and 22 other tissues See more
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Genomic context

Location:
1q41
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (218344196..218345678, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (217578960..217580442, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (218517538..218519020, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2540 Neighboring gene ribosomal RNA processing 15 homolog Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1819 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2541 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:218520227-218520727 Neighboring gene ribosomal protein S26 pseudogene 17 Neighboring gene transforming growth factor beta 2 Neighboring gene TGFB2 overlapping transcript 1 Neighboring gene Sharpr-MPRA regulatory region 8131 Neighboring gene long intergenic non-protein coding RNA 2869

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046268.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC096638

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    218344196..218345678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    217578960..217580442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)