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KE627_RS11215 Nif3-like dinuclear metal center hexameric protein [ Lentilactobacillus buchneri ]

Gene ID: 72462099, updated on 6-Oct-2023

Summary

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Gene symbol
KE627_RS11215
Gene description
Nif3-like dinuclear metal center hexameric protein
Locus tag
KE627_RS11215
Gene type
protein coding
Organism
Lentilactobacillus buchneri (strain: ATCC 4005, culture-collection: ATCC:4005, type-material: type strain of Lactobacillus buchneri)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus
Old locus tag
KE627_11215
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Genomic context

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NZ_CP073066.1Genomic Context describing neighboring genes Neighboring gene DNA primase Neighboring gene RNA polymerase sigma factor RpoD Neighboring gene tRNA (adenine(22)-N(1))-methyltransferase TrmK Neighboring gene peptidase T Neighboring gene ATP-dependent chaperone ClpB

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP073066.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of a conserved hypothetical protein MJ0927 from Methanocaldococcus jannaschii reveals a novel quaternary assembly in the Nif3 family. Chen SC, et al. Biomed Res Int, 2014. PMID 25243119, Free PMC Article
  2. Structure of a conserved hypothetical protein SA1388 from S. aureus reveals a capped hexameric toroid with two PII domain lids and a dinuclear metal center. Saikatendu KS, et al. BMC Struct Biol, 2006 Dec 23. PMID 17187687, Free PMC Article
  3. Biochemical Characterization of Hypothetical Proteins from Helicobacter pylori. Choi HP, et al. PLoS One, 2013. PMID 23825549, Free PMC Article
  4. Possible Role of Escherichia coli Protein YbgI. Sergeeva OV, et al. Biochemistry (Mosc), 2018 Mar. PMID 29625546
  5. Crystal structure of Escherichia coli protein ybgI, a toroidal structure with a dinuclear metal site. Ladner JE, et al. BMC Struct Biol, 2003 Sep 30. PMID 14519207, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Nif3-like dinuclear metal center hexameric protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP073066.1 Reference assembly

    Range
    2337231..2338346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013727836.1 Nif3-like dinuclear metal center hexameric protein [Lentilactobacillus buchneri]

    See identical proteins and their annotated locations for WP_013727836.1

    UniProtKB/TrEMBL
    A0A4R5NL40, A0A8E1X2E9
    Conserved Domains (2) summary
    COG3323
    Location:129 → 235
    YqfO; Uncharacterized protein YbgI, a toroidal structure with a dinuclear metal site [Function unknown]
    pfam01784
    Location:5 → 348
    NIF3; NIF3 (NGG1p interacting factor 3)
Nucleotide Protein
Heading Accession and Version