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LOC724084 zinc finger protein 706 pseudogene [ Homo sapiens (human) ]

Gene ID: 724084, updated on 17-Sep-2024

Summary

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Gene symbol
LOC724084
Gene description
zinc finger protein 706 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC724084 in Genome Data Viewer
Location:
1q42.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (224175147..224175910, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (223364390..223365153, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (224362849..224363612, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373056 Neighboring gene RN7SK pseudogene 49 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2596 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2597 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2598 Neighboring gene F-box protein 28 Neighboring gene UPF0764 protein C16orf89-like Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:224333093-224333594 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:224341785-224342286 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:224342287-224342786 Neighboring gene Sharpr-MPRA regulatory region 12248 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:224350114-224350614 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:224356823-224357792 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:224357793-224358762 Neighboring gene small nucleolar RNA SNORA72 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:224370121-224370951 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:224370952-224371781 Neighboring gene Sharpr-MPRA regulatory region 9300 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2602 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1850 Neighboring gene delta 4-desaturase, sphingolipid 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005606.5 

    Range
    101..864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    224175147..224175910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    223364390..223365153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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