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C4BPAP2 C4BPA pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 724, updated on 17-Sep-2024

Summary

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Official Symbol
C4BPAP2provided by HGNC
Official Full Name
C4BPA pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:1327
See related
Ensembl:ENSG00000232621 AllianceGenome:HGNC:1327
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C4BPAL2
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Genomic context

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See C4BPAP2 in Genome Data Viewer
Location:
1q32.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (207225798..207229202)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (206491093..206494497)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (207399143..207402547)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985251 Neighboring gene Sharpr-MPRA regulatory region 9788 Neighboring gene C4BPA pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:207369102-207369602 Neighboring gene C4BPA pseudogene 3 Neighboring gene long intergenic non-protein coding RNA 2942 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:207489929-207490758 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2440 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1770 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2441 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2442 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2443 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2444 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2445 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:207519691-207520191 Neighboring gene CD55 molecule (Cromer blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C4BPAL2: a second duplication of the C4BPA gene in the human RCA gene cluster. Pardo-Manuel de Villena F, et al. Immunogenetics, 1995. PMID 7806286

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • complement component 4 binding protein, alpha pseudogene 2
  • complement component 4 binding protein, alpha-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002761.2 

    Range
    101..3505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    207225798..207229202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    206491093..206494497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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