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TRT-TGT3-1 tRNA-Thr (anticodon TGT) 3-1 [ Homo sapiens (human) ]

Gene ID: 7237, updated on 17-Sep-2024

Summary

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Official Symbol
TRT-TGT3-1provided by HGNC
Official Full Name
tRNA-Thr (anticodon TGT) 3-1provided by HGNC
Primary source
HGNC:HGNC:12351
See related
MIM:189933; AllianceGenome:HGNC:12351
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRT2; TRNAT2
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Genomic context

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See TRT-TGT3-1 in Genome Data Viewer
Location:
14q11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (20613790..20613862, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (14810904..14810976, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (21081949..21082021, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903280 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5568 Neighboring gene tRNA-Leu (anticodon AAG) 2-3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8081 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5569 Neighboring gene tRNA-Pro (anticodon AGG) 2-6 Neighboring gene ribosomal protein S26 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8082 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr14:21093326-21094068 Neighboring gene tRNA-Leu (anticodon TAG) 2-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • tRNA threonine (UGU) 2
  • tRNA threonine-2
  • tRNA-Thr-TGT-3-1
  • transfer RNA threonine (UGU) 2
  • transfer RNA threonine 2 (anticodon UGU)
  • transfer RNA-Thr (TGT) 3-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    20613790..20613862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    14810904..14810976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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