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CFAP410 cilia and flagella associated protein 410 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 722168, updated on 17-Aug-2024

Summary

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Official Symbol
CFAP410provided by VGNC
Official Full Name
cilia and flagella associated protein 410provided by VGNC
Primary source
VGNC:VGNC:70938
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C3H21orf2
Orthologs
human mouse all
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Genomic context

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See CFAP410 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (2388757..2397754)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (2380744..2389698)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676790 Neighboring gene Z6 small nucleolar RNA Neighboring gene Z6 small nucleolar RNA Neighboring gene transient receptor potential cation channel subfamily M member 2 Neighboring gene uncharacterized LOC106997221 Neighboring gene phosphofructokinase, liver type Neighboring gene autoimmune regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 410
Names
chromosome 3 C21orf2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    2388757..2397754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845284.1 → XP_028701117.1  cilia- and flagella-associated protein 410 isoform X2

    UniProtKB/TrEMBL
    A0A5F8ALE5
    Conserved Domains (3) summary
    sd00035
    Location:110 → 131
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:108 → 148
    LRR_4; Leucine Rich repeats (2 copies)
    pfam14580
    Location:132 → 198
    LRR_9; Leucine-rich repeat

  2. XM_028845283.1 → XP_028701116.1  cilia- and flagella-associated protein 410 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ALE5
    Conserved Domains (3) summary
    sd00035
    Location:110 → 131
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:108 → 148
    LRR_4; Leucine Rich repeats (2 copies)
    pfam14580
    Location:132 → 198
    LRR_9; Leucine-rich repeat

  3. XM_015132771.2 → XP_014988257.2  cilia- and flagella-associated protein 410 isoform X3

    UniProtKB/TrEMBL
    H9FZG9
    Conserved Domains (3) summary
    sd00035
    Location:42 → 63
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam13855
    Location:19 → 74
    LRR_8; Leucine rich repeat
    pfam14580
    Location:64 → 130
    LRR_9; Leucine-rich repeat

  4. XM_015132772.2 → XP_014988258.2  cilia- and flagella-associated protein 410 isoform X4

    Conserved Domains (3) summary
    sd00035
    Location:42 → 63
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam13855
    Location:19 → 74
    LRR_8; Leucine rich repeat
    pfam14580
    Location:64 → 130
    LRR_9; Leucine-rich repeat

  5. XM_028845285.1 → XP_028701118.1  cilia- and flagella-associated protein 410 isoform X5

    Conserved Domains (2) summary
    sd00035
    Location:34 → 57
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam14580
    Location:34 → 100
    LRR_9; Leucine-rich repeat

  6. XM_028845286.1 → XP_028701119.1  cilia- and flagella-associated protein 410 isoform X6

    Conserved Domains (2) summary
    sd00035
    Location:34 → 57
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam14580
    Location:34 → 100
    LRR_9; Leucine-rich repeat
Nucleotide Protein
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