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TRP-TGG3-1 tRNA-Pro (anticodon TGG) 3-1 [ Homo sapiens (human) ]

Gene ID: 7219, updated on 10-Oct-2023

Summary

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Official Symbol
TRP-TGG3-1provided by HGNC
Official Full Name
tRNA-Pro (anticodon TGG) 3-1provided by HGNC
Primary source
HGNC:HGNC:12332
See related
MIM:189912; AllianceGenome:HGNC:12332
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRP3; TRNAP3; TRP-TGG3-5
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Genomic context

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Location:
5q35.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (181188854..181188925, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (181748889..181748960, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (180615854..180615925, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16782 Neighboring gene tRNA-Leu (anticodon AAG) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16783 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23781 Neighboring gene tRNA-Val (anticodon AAC) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16784 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16785 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23782 Neighboring gene long intergenic non-protein coding RNA 1962 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16786 Neighboring gene tRNA-Thr (anticodon TGT) 6-1 Neighboring gene TRIM7 antisense RNA 2 Neighboring gene tripartite motif containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A human tRNA gene heterocluster encoding threonine, proline and valine tRNAs. Shortridge RD, et al. Gene, 1989 Jul 15. PMID 2676726
  2. Localization of three DNA segments encompassing tRNA genes to human chromosomes 1, 5, and 16: proposed mechanism and significance of tRNA gene dispersion. McBride OW, et al. Genomics, 1989 Oct. PMID 2613239
  3. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA proline (UGG) 3
  • tRNA-Pro-TGG-3-1
  • tRNA-Pro-TGG-3-5
  • transfer RNA proline (UGG) 3
  • transfer RNA proline 3 (anticodon UGG)
  • transfer RNA-Pro (TGG) 3-1
  • transfer RNA-Pro (TGG) 3-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    181188854..181188925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    181748889..181748960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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