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TRK-TTT3-5 tRNA-Lys (anticodon TTT) 3-5 [ Homo sapiens (human) ]

Gene ID: 7206, updated on 17-Sep-2024

Summary

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Official Symbol
TRK-TTT3-5provided by HGNC
Official Full Name
tRNA-Lys (anticodon TTT) 3-5provided by HGNC
Primary source
HGNC:HGNC:12314
See related
MIM:189918; AllianceGenome:HGNC:12314
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRK1; TRNAK1; TRK-TTT3-4
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Genomic context

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See TRK-TTT3-5 in Genome Data Viewer
Location:
17p13.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (8119155..8119227)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (8024530..8024602)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (8022473..8022545)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene microRNA 4314 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8150 Neighboring gene arachidonate epidermal lipoxygenase 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8151 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:8020998-8022197 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11663 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8152 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8153 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8154 Neighboring gene tRNA-Gln (anticodon CTG) 1-5 Neighboring gene tRNA-Leu (anticodon TAG) 1-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence of a segment of human DNA containing the three tRNA genes. Roy KL, et al. Nucleic Acids Res, 1982 Nov 25. PMID 6296772, Free PMC Article
  2. Analysis of a human gene cluster coding for tRNA(GAAPhe) and tRNA(UUULys). Doran JL, et al. Gene, 1987. PMID 3678837
  3. Chromosomal assignment of a large tRNA gene cluster (tRNA(Leu), tRNA(Gln), tRNA(Lys), tRNA(Arg), tRNA(Gly)) to 17p13.1. Morrison N, et al. Hum Genet, 1991 Jun. PMID 2066114
  4. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA lysine 1 (anticodon UUU)
  • tRNA-Lys (TTT) 3-5
  • tRNA-Lys-TTT-3-4
  • transfer RNA lysine 1 (anticodon UUU)
  • transfer RNA-Lys (TTT) 3-4
  • transfer RNA-Lys (TTT) 3-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    8119155..8119227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    8024530..8024602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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