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PHATRDRAFT_12405 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7201041, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_12405
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_12405
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PHATRDRAFT_12405 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_011676.1 (828920..829822)

Chromosome 8 - NC_011676.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene P3A, P type ATPase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011676.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011676.1 Reference assembly

    Range
    828920..829822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002180092.1 → XP_002180128.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002180128.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9S2A9, B7FZC9
    Conserved Domains (2) summary
    PTZ00169
    Location:8 → 300
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:211 → 300
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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