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CLAFUR5_08447 L-galactonate dehydratase [ Fulvia fulva ]

Gene ID: 71988325, updated on 23-Oct-2023

Summary

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Gene symbol
CLAFUR5_08447
Gene description
L-galactonate dehydratase
Locus tag
CLAFUR5_08447
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Fulvia fulva (strain: Race5_Kim, nat-host: Solanum lycopersicum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Fulvia
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Genomic context

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See CLAFUR5_08447 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_063014.1 (4678553..4679954, complement)

Chromosome 3 - NC_063014.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene putative enoyl-CoA hydratase 2, mitochondrial Neighboring gene Mitochondrial inner membrane protease atp23 Neighboring gene Ecp24-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063014.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A chromosome-scale genome assembly of the tomato pathogen Cladosporium fulvum reveals a compartmentalized genome architecture and the presence of a dispensable chromosome. Zaccaron AZ, et al. Microb Genom, 2022 Apr. PMID 35471194, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-fuconate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-galactonate dehydratase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_063014.1 Reference assembly

    Range
    4678553..4679954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047907595.1 → XP_047759630.1  L-galactonate dehydratase [Fulvia fulva]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A9Q8LDK7
Nucleotide Protein
Heading Accession and Version

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