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PAFAH2 platelet activating factor acetylhydrolase 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719750, updated on 17-Aug-2024

Summary

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Official Symbol
PAFAH2provided by VGNC
Official Full Name
platelet activating factor acetylhydrolase 2provided by VGNC
Primary source
VGNC:VGNC:75749
Locus tag
EGK_00404
See related
Ensembl:ENSMMUG00000000655
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PAFAH2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (198797942..198839924)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (24758363..24800375, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997045 Neighboring gene exostosin like glycosyltransferase 1 Neighboring gene small Cajal body-specific RNA 18 Neighboring gene eukaryotic translation initiation factor 2 subunit 3 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106997022 Neighboring gene transmembrane protein 258 pseudogene Neighboring gene uncharacterized LOC114673686 Neighboring gene stathmin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-alkyl-2-acetylglycerophosphocholine esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase 2, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    198797942..198839924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028837769.1 → XP_028693602.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A5F8A8A9
    Related
    ENSMMUP00000074177.1, ENSMMUT00000092326.1
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 351
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

  2. XM_028837774.1 → XP_028693607.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X4

    UniProtKB/TrEMBL
    A0A5F8A135
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 310
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

  3. XM_028837763.1 → XP_028693596.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A1D5QCU2
    Related
    ENSMMUP00000000882.4, ENSMMUT00000000944.4
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 389
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II

  4. XM_015131751.2 → XP_014987237.1  platelet-activating factor acetylhydrolase 2, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A1D5QCU2, A0A8J8YFU7, F6WZL7, G7MHQ4, H9Z394
    Related
    ENSMMUP00000045861.2, ENSMMUT00000073282.2
    Conserved Domains (1) summary
    pfam03403
    Location:1 → 381
    PAF-AH_p_II; Platelet-activating factor acetylhydrolase, isoform II
Nucleotide Protein
Heading Accession and Version

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