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SNRPC small nuclear ribonucleoprotein polypeptide C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718654, updated on 5-Mar-2024

Summary

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Gene symbol
SNRPC
Gene description
small nuclear ribonucleoprotein polypeptide C
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SNRPC in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (134706272..134722595, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (35638025..35654348)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 11 Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene histone H3.3C-like Neighboring gene uncharacterized LOC114677624 Neighboring gene V-type proton ATPase subunit F pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene inflammation and lipid regulator with UBA-like and NBR1-like domains

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pre-mRNA 5'-splice site binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 5'-splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U1 small nuclear ribonucleoprotein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    134706272..134722595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001111611.4 → XP_001111611.3  U1 small nuclear ribonucleoprotein C isoform X2

    Conserved Domains (1) summary
    pfam06220
    Location:55 → 92
    zf-U1; U1 zinc finger

  2. XM_015136170.2 → XP_014991656.2  U1 small nuclear ribonucleoprotein C isoform X1

    Conserved Domains (1) summary
    pfam06220
    Location:55 → 92
    zf-U1; U1 zinc finger
Nucleotide Protein
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