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WDR46 WD repeat domain 46 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718220, updated on 17-Aug-2024

Summary

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Official Symbol
WDR46provided by VGNC
Official Full Name
WD repeat domain 46provided by VGNC
Primary source
VGNC:VGNC:78940
See related
Ensembl:ENSMMUG00000003869
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See WDR46 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (136217493..136227035)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (34123379..34132985, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 22 Neighboring gene TAP binding protein Neighboring gene ral guanine nucleotide dissociation stimulator like 2 Neighboring gene prefoldin subunit 6 Neighboring gene beta-1,3-galactosyltransferase 4 Neighboring gene ribosomal protein S18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    136217493..136227035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015136103.2 → XP_014991589.2  WD repeat-containing protein 46 isoform X1

    UniProtKB/TrEMBL
    H9G1V3
    Conserved Domains (4) summary
    PTZ00449
    Location:15 → 133
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    smart01033
    Location:443 → 521
    BING4CT; BING4CT (NUC141) domain
    sd00039
    Location:202 → 238
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:202 → 460
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_001116178.4 → XP_001116178.3  WD repeat-containing protein 46 isoform X2

    UniProtKB/TrEMBL
    F6TUQ8, H9G1V3
    Related
    ENSMMUP00000033869.3, ENSMMUT00000040842.3
    Conserved Domains (4) summary
    PTZ00449
    Location:15 → 133
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    smart01033
    Location:443 → 521
    BING4CT; BING4CT (NUC141) domain
    sd00039
    Location:202 → 238
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:202 → 460
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_028847681.1 → XP_028703514.1  WD repeat-containing protein 46 isoform X3

    UniProtKB/TrEMBL
    H9G1V3
    Conserved Domains (4) summary
    PTZ00449
    Location:15 → 133
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00039
    Location:202 → 238
    7WD40; WD40 repeat [structural motif]
    cl06957
    Location:423 → 464
    BING4CT; BING4CT (NUC141) domain
    cl29593
    Location:202 → 421
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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