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ODF2 outer dense fiber of sperm tails 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717505, updated on 17-Aug-2024

Summary

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Official Symbol
ODF2provided by VGNC
Official Full Name
outer dense fiber of sperm tails 2provided by VGNC
Primary source
VGNC:VGNC:75580
See related
Ensembl:ENSMMUG00000005987
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ODF2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (12080824..12127854, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (10365629..10412143, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672723 Neighboring gene GLE1 RNA export mediator Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene protein PAT1 homolog 1-like Neighboring gene cerebral endothelial cell adhesion molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
outer dense fiber protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    12080824..12127854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116687.2 → XP_014972173.1  outer dense fiber protein 2 isoform X6

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:119 → 803
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_015116683.2 → XP_014972169.1  outer dense fiber protein 2 isoform X3

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:121 → 805
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_001111592.4 → XP_001111592.2  outer dense fiber protein 2 isoform X15

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    pfam00038
    Location:529 → 857
    Filament; Intermediate filament protein

  4. XM_028834763.1 → XP_028690596.1  outer dense fiber protein 2 isoform X14

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:202 → 886
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_015116681.2 → XP_014972167.1  outer dense fiber protein 2 isoform X1

    UniProtKB/TrEMBL
    G7NFS2
    Related
    ENSMMUP00000039916.3, ENSMMUT00000046885.3
    Conserved Domains (1) summary
    pfam00038
    Location:509 → 837
    Filament; Intermediate filament protein

  6. XM_015116700.2 → XP_014972186.1  outer dense fiber protein 2 isoform X12

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:77 → 761
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_015116686.2 → XP_014972172.1  outer dense fiber protein 2 isoform X5

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:119 → 803
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  8. XM_001111743.2 → XP_001111743.1  outer dense fiber protein 2 isoform X7

    UniProtKB/TrEMBL
    F7GVV2, F7HTS0
    Related
    ENSMMUP00000039920.3, ENSMMUT00000046888.3
    Conserved Domains (1) summary
    COG1196
    Location:114 → 798
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  9. XM_001111282.4 → XP_001111282.1  outer dense fiber protein 2 isoform X4

    See identical proteins and their annotated locations for XP_001111282.1

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:119 → 803
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  10. XM_001110960.4 → XP_001110960.2  outer dense fiber protein 2 isoform X4

    See identical proteins and their annotated locations for XP_001110960.2

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:119 → 803
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  11. XM_015116690.2 → XP_014972176.1  outer dense fiber protein 2 isoform X7

    UniProtKB/TrEMBL
    F7GVV2, F7HTS0
    Conserved Domains (1) summary
    COG1196
    Location:114 → 798
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  12. XM_015116698.2 → XP_014972184.1  outer dense fiber protein 2 isoform X11

    UniProtKB/TrEMBL
    F7GVV2
    Conserved Domains (1) summary
    COG1196
    Location:95 → 779
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  13. XM_015116695.2 → XP_014972181.1  outer dense fiber protein 2 isoform X10

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:100 → 784
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  14. XM_015116682.2 → XP_014972168.1  outer dense fiber protein 2 isoform X2

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:144 → 828
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  15. XM_015116688.2 → XP_014972174.1  outer dense fiber protein 2 isoform X7

    UniProtKB/TrEMBL
    F7GVV2, F7HTS0
    Conserved Domains (1) summary
    COG1196
    Location:114 → 798
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  16. XM_015116697.2 → XP_014972183.1  outer dense fiber protein 2 isoform X11

    UniProtKB/TrEMBL
    F7GVV2
    Conserved Domains (1) summary
    COG1196
    Location:95 → 779
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  17. XM_015116693.2 → XP_014972179.1  outer dense fiber protein 2 isoform X8

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:100 → 784
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  18. XM_015116694.2 → XP_014972180.1  outer dense fiber protein 2 isoform X9

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:100 → 784
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  19. XM_015116691.2 → XP_014972177.1  outer dense fiber protein 2 isoform X8

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:100 → 784
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  20. XM_015116692.2 → XP_014972178.1  outer dense fiber protein 2 isoform X8

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:100 → 784
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  21. XM_015116684.2 → XP_014972170.1  outer dense fiber protein 2 isoform X4

    UniProtKB/TrEMBL
    G7NFS2
    Conserved Domains (1) summary
    COG1196
    Location:119 → 803
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  22. XM_028834762.1 → XP_028690595.1  outer dense fiber protein 2 isoform X13

    UniProtKB/TrEMBL
    F7HTR4
    Conserved Domains (1) summary
    COG1196
    Location:272 → 627
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  23. XM_028834764.1 → XP_028690597.1  outer dense fiber protein 2 isoform X16

    UniProtKB/TrEMBL
    H9F208
    Conserved Domains (2) summary
    COG1196
    Location:241 → 561
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:99 → 379
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

RNA

  1. XR_003723131.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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