U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NFIX nuclear factor I X [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717108, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
NFIXprovided by VGNC
Official Full Name
nuclear factor I Xprovided by VGNC
Primary source
VGNC:VGNC:75338
See related
Ensembl:ENSMMUG00000019292
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NFIX in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (12586239..12689842)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (12968298..13073594)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene GADD45G interacting protein 1 Neighboring gene DAN domain BMP antagonist family member 5 Neighboring gene LYL1 basic helix-loop-helix family member Neighboring gene tRNA methyltransferase 1 Neighboring gene nucleus accumbens associated 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear factor 1 X-type

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    12586239..12689842
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015123059.2 → XP_014978545.2  nuclear factor 1 X-type isoform X3

    UniProtKB/TrEMBL
    G7NLC7
    Conserved Domains (3) summary
    pfam10524
    Location:9 → 46
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:213 → 502
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:68 → 170
    MH1; N-terminal Mad Homology 1 (MH1) domain

  2. XM_028840302.1 → XP_028696135.1  nuclear factor 1 X-type isoform X11

    UniProtKB/TrEMBL
    I0FJQ5
    Conserved Domains (3) summary
    pfam10524
    Location:9 → 46
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:213 → 377
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:68 → 170
    MH1; N-terminal Mad Homology 1 (MH1) domain

  3. XM_028840301.1 → XP_028696134.1  nuclear factor 1 X-type isoform X9

    UniProtKB/TrEMBL
    F6SAI3, I0FJQ5
    Related
    ENSMMUP00000025349.4, ENSMMUT00000027096.4
    Conserved Domains (3) summary
    pfam10524
    Location:9 → 46
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:213 → 418
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:68 → 170
    MH1; N-terminal Mad Homology 1 (MH1) domain

  4. XM_015123053.2 → XP_014978539.1  nuclear factor 1 X-type isoform X5

    UniProtKB/TrEMBL
    A0A1D5QZS6, G7NLC7
    Related
    ENSMMUP00000053559.1, ENSMMUT00000056067.2
    Conserved Domains (3) summary
    pfam10524
    Location:2 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:205 → 494
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:60 → 162
    MH1; N-terminal Mad Homology 1 (MH1) domain

  5. XM_015123058.2 → XP_014978544.1  nuclear factor 1 X-type isoform X10

    UniProtKB/TrEMBL
    I0FJQ5
    Conserved Domains (3) summary
    pfam10524
    Location:2 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:205 → 410
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:60 → 162
    MH1; N-terminal Mad Homology 1 (MH1) domain

  6. XM_028840300.1 → XP_028696133.1  nuclear factor 1 X-type isoform X8

    UniProtKB/TrEMBL
    F6SA43, G7NLC7
    Related
    ENSMMUP00000025350.4, ENSMMUT00000027097.4
    Conserved Domains (3) summary
    pfam10524
    Location:2 → 38
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:205 → 453
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:60 → 162
    MH1; N-terminal Mad Homology 1 (MH1) domain

  7. XM_001110651.4 → XP_001110651.2  nuclear factor 1 X-type isoform X2

    See identical proteins and their annotated locations for XP_001110651.2

    UniProtKB/TrEMBL
    G7NLC7
    Related
    ENSMMUP00000025352.3, ENSMMUT00000027099.3
    Conserved Domains (3) summary
    pfam10524
    Location:18 → 54
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:221 → 510
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:76 → 178
    MH1; N-terminal Mad Homology 1 (MH1) domain

  8. XM_015123052.2 → XP_014978538.1  nuclear factor 1 X-type isoform X4

    UniProtKB/TrEMBL
    I0FJQ5
    Conserved Domains (3) summary
    pfam10524
    Location:65 → 105
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:272 → 477
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:127 → 229
    MH1; N-terminal Mad Homology 1 (MH1) domain

  9. XM_028840299.1 → XP_028696132.1  nuclear factor 1 X-type isoform X6

    UniProtKB/TrEMBL
    I0FJQ5
    Conserved Domains (3) summary
    pfam00859
    Location:272 → 477
    CTF_NFI; CTF/NF-I family transcription modulation region
    pfam10524
    Location:66 → 105
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    cl00055
    Location:127 → 229
    MH1; N-terminal Mad Homology 1 (MH1) domain

  10. XM_015123049.2 → XP_014978535.1  nuclear factor 1 X-type isoform X1

    UniProtKB/TrEMBL
    G7NLC7
    Conserved Domains (3) summary
    pfam10524
    Location:65 → 105
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:272 → 520
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:127 → 229
    MH1; N-terminal Mad Homology 1 (MH1) domain

  11. XM_015123054.2 → XP_014978540.1  nuclear factor 1 X-type isoform X7

    UniProtKB/TrEMBL
    I0FJQ5
    Conserved Domains (3) summary
    pfam10524
    Location:65 → 105
    NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
    pfam00859
    Location:272 → 436
    CTF_NFI; CTF/NF-I family transcription modulation region
    cl00055
    Location:127 → 229
    MH1; N-terminal Mad Homology 1 (MH1) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.