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PDPN podoplanin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716250, updated on 17-Aug-2024

Summary

Official Symbol
PDPNprovided by VGNC
Official Full Name
podoplaninprovided by VGNC
Primary source
VGNC:VGNC:75884
See related
Ensembl:ENSMMUG00000000145
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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Genomic context

See PDPN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (211307700..211343873, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (12397792..12434067)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene PR/SET domain 2 Neighboring gene small Cajal body-specific RNA 11 Neighboring gene bromodomain and WD repeat-containing protein 1-like Neighboring gene uncharacterized LOC114674106

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in filopodium IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    211307700..211343873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015114458.2XP_014969944.2  podoplanin isoform X2

    UniProtKB/TrEMBL
    A0A1D5QHQ2, G7MH29
    Related
    ENSMMUP00000047574.2, ENSMMUT00000055381.2
    Conserved Domains (1) summary
    pfam05808
    Location:28161
    Podoplanin
  2. XM_001106933.4XP_001106933.3  podoplanin isoform X3

    UniProtKB/TrEMBL
    G7MH29
    Conserved Domains (1) summary
    pfam05808
    Location:28159
    Podoplanin
  3. XM_028839581.1XP_028695414.1  podoplanin isoform X1

    Conserved Domains (1) summary
    pfam05808
    Location:2125
    Podoplanin