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POM121C POM121 transmembrane nucleoporin C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716176, updated on 5-Mar-2024

Summary

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Gene symbol
POM121C
Gene description
POM121 transmembrane nucleoporin C
See related
Ensembl:ENSMMUG00000022772
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
POM121
Orthologs
human mouse all
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Genomic context

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See POM121C in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (45595648..45650480)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (41808197..41863899)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene huntingtin interacting protein 1 Neighboring gene uncharacterized LOC114676879 Neighboring gene uncharacterized LOC106997355 Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene uncharacterized LOC114676880 Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene tripartite motif containing 50 Neighboring gene FKBP prolyl isomerase family member 6 (inactive)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear envelope pore membrane protein POM 121C
Names
POM121 membrane glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    45595648..45650480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015133306.2 → XP_014988792.2  nuclear envelope pore membrane protein POM 121C isoform X3

    UniProtKB/TrEMBL
    H9G2L4
    Conserved Domains (3) summary
    PHA03247
    Location:300 → 483
    PHA03247; large tegument protein UL36; Provisional
    pfam15229
    Location:52 → 287
    POM121; POM121 family
    pfam15967
    Location:783 → 967
    Nucleoporin_FG2; Nucleoporin FG repeated region

  2. XM_001110260.4 → XP_001110260.2  nuclear envelope pore membrane protein POM 121C isoform X1

    UniProtKB/TrEMBL
    F7G907, F7HEM9
    Related
    ENSMMUP00000003364.4, ENSMMUT00000003560.4
    Conserved Domains (3) summary
    PHA03247
    Location:538 → 721
    PHA03247; large tegument protein UL36; Provisional
    pfam15229
    Location:290 → 525
    POM121; POM121 family
    pfam15967
    Location:1021 → 1205
    Nucleoporin_FG2; Nucleoporin FG repeated region

  3. XM_028845669.1 → XP_028701502.1  nuclear envelope pore membrane protein POM 121C isoform X2

    UniProtKB/TrEMBL
    A0A5F8A1Q5, F7G907
    Related
    ENSMMUP00000070825.1, ENSMMUT00000096418.1
    Conserved Domains (3) summary
    PHA03247
    Location:517 → 945
    PHA03247; large tegument protein UL36; Provisional
    pfam15229
    Location:290 → 525
    POM121; POM121 family
    pfam15967
    Location:962 → 1146
    Nucleoporin_FG2; Nucleoporin FG repeated region
Nucleotide Protein
Heading Accession and Version

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