U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC17A5 solute carrier family 17 member 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716100, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SLC17A5provided by VGNC
Official Full Name
solute carrier family 17 member 5provided by VGNC
Primary source
VGNC:VGNC:77405
Locus tag
EGK_15080
See related
Ensembl:ENSMMUG00000008133
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
sialin
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC17A5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (99282081..99343498)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (71610892..71675038, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene protein FAM117A pseudogene Neighboring gene CD109 molecule Neighboring gene uncharacterized LOC114677564 Neighboring gene uncharacterized LOC114677565 Neighboring gene eukaryotic translation initiation factor 2 subunit 3-like Neighboring gene eukaryotic translation elongation factor 1 alpha 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sialin
Names
solute carrier family 17 (anion/sugar transporter), member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260632.1 → NP_001247561.1  sialin

    See identical proteins and their annotated locations for NP_001247561.1

    Status: PROVISIONAL

    Source sequence(s)
    JU475147
    UniProtKB/TrEMBL
    A0A5F8A6M8, A0A8J8YD47, G7MPQ9
    Related
    ENSMMUP00000073028.1, ENSMMUT00000084481.1
    Conserved Domains (1) summary
    cd17381
    Location:42 → 478
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    99282081..99343498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015136738.2 → XP_014992224.1  sialin isoform X3

    Conserved Domains (1) summary
    cd17381
    Location:14 → 401
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

  2. XM_015136737.2 → XP_014992223.1  sialin isoform X2

    Conserved Domains (1) summary
    cd17381
    Location:1 → 412
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

  3. XM_015136736.2 → XP_014992222.1  sialin isoform X1

    UniProtKB/TrEMBL
    F7HGP8
    Related
    ENSMMUP00000010648.3, ENSMMUT00000011362.4
    Conserved Domains (2) summary
    cd06174
    Location:82 → 461
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00894
    Location:16 → 474
    2A0114euk; Na(+)-dependent inorganic phosphate cotransporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.