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PABPC1L poly(A) binding protein cytoplasmic 1 like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711882, updated on 17-Aug-2024

Summary

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Official Symbol
PABPC1Lprovided by VGNC
Official Full Name
poly(A) binding protein cytoplasmic 1 likeprovided by VGNC
Primary source
VGNC:VGNC:97113
See related
Ensembl:ENSMMUG00000013209
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PABPC1L in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (80150922..80198286)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (19518436..19547866, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670486 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta Neighboring gene translocase of outer mitochondrial membrane 34 Neighboring gene serine/threonine kinase 4 Neighboring gene potassium voltage-gated channel modifier subfamily S member 1 Neighboring gene WAP four-disulfide core domain 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(U) RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194450.2 → NP_001181379.1  polyadenylate-binding protein 1-like

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000030
    UniProtKB/TrEMBL
    F6XFC1, G7N4R7
    Related
    ENSMMUP00000017356.4, ENSMMUT00000018532.4
    Conserved Domains (6) summary
    TIGR01628
    Location:11 → 601
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12378
    Location:12 → 91
    RRM1_I_PABPs; RNA recognition motif 1 in type I polyadenylate-binding proteins
    cd12379
    Location:97 → 172
    RRM2_I_PABPs; RNA recognition motif 2 found in type I polyadenylate-binding proteins
    cd12380
    Location:190 → 269
    RRM3_I_PABPs; RNA recognition motif 3 found in type I polyadenylate-binding proteins
    cd12381
    Location:293 → 370
    RRM4_I_PABPs; RNA recognition motif 4 in type I polyadenylate-binding proteins
    pfam00658
    Location:533 → 600
    PABP; Poly-adenylate binding protein, unique domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    80150922..80198286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028827341.1 → XP_028683174.1  polyadenylate-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    G7N4R7
    Conserved Domains (1) summary
    TIGR01628
    Location:11 → 606
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

  2. XM_015148833.2 → XP_015004319.1  polyadenylate-binding protein 1-like isoform X2

    Conserved Domains (1) summary
    TIGR01628
    Location:11 → 324
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
Nucleotide Protein
Heading Accession and Version

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