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4933408N05Rik RIKEN cDNA 4933408N05 gene [ Mus musculus (house mouse) ]

Gene ID: 71122, updated on 17-Aug-2024

Summary

Official Symbol
4933408N05Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933408N05 geneprovided by MGI
Primary source
MGI:MGI:1918372
See related
AllianceGenome:MGI:1918372
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 1.5), cerebellum adult (RPKM 0.2) and 1 other tissue See more
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Genomic context

See 4933408N05Rik in Genome Data Viewer
Location:
8 E1; 8 60.83 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (115067901..115078218, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (114341161..114351478, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30107 Neighboring gene STARR-seq mESC enhancer starr_22765 Neighboring gene STARR-positive B cell enhancer ABC_E9028 Neighboring gene STARR-seq mESC enhancer starr_22767 Neighboring gene nudix hydrolase 7 Neighboring gene vesicle amine transport protein 1 like Neighboring gene STARR-positive B cell enhancer ABC_E3807 Neighboring gene STARR-seq mESC enhancer starr_22773 Neighboring gene predicted gene, 30330 Neighboring gene C-type lectin domain family 3, member a Neighboring gene WW domain-containing oxidoreductase Neighboring gene predicted gene 16116

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Clone Names

  • AC151980.4

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045831.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK016745

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    115067901..115078218 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)