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Ankrd68 ankyrin repeat domain 68 [ Mus musculus (house mouse) ]

Gene ID: 70981, updated on 5-Nov-2024

Summary

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Official Symbol
Ankrd68provided by MGI
Official Full Name
ankyrin repeat domain 68provided by MGI
Primary source
MGI:MGI:1918231
See related
Ensembl:ENSMUSG00000026774 AllianceGenome:MGI:1918231
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fem1al; Potegl; 4931423N10Rik
Summary
Is expressed in genitourinary system. Orthologous to several human genes including POTEA (POTE ankyrin domain family member A); POTEB (POTE ankyrin domain family member B); and POTEB2 (POTE ankyrin domain family member B2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 1.9), cerebellum adult (RPKM 0.2) and 2 other tissues See more
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Genomic context

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See Ankrd68 in Genome Data Viewer
Location:
2 A3; 2 15.25 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (23094769..23157141)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (23204748..23267129)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3361 Neighboring gene YME1-like 1 (S. cerevisiae) Neighboring gene nucleophosmin 1 pseudogene Neighboring gene predicted gene 13422 Neighboring gene neurexophilin 2 Neighboring gene predicted gene, 34769 Neighboring gene STARR-seq mESC enhancer starr_03927 Neighboring gene STARR-seq mESC enhancer starr_03928 Neighboring gene STARR-seq mESC enhancer starr_03929 Neighboring gene STARR-seq mESC enhancer starr_03930 Neighboring gene STARR-seq mESC enhancer starr_03931 Neighboring gene speckle-type BTB/POZ protein-like Neighboring gene ubiquitin-conjugating enzyme E2D 3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Yokoyama S, et al. Dev Cell, 2009 Dec. PMID 20059953, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC70981
Names
POTE ankyrin domain family, member G like
fem-1 homolog A like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027635.1 → NP_081911.1  uncharacterized protein LOC70981

    See identical proteins and their annotated locations for NP_081911.1

    Status: VALIDATED

    Source sequence(s)
    AK016475, AV274829
    Consensus CDS
    CCDS50517.1
    UniProtKB/TrEMBL
    Q9D4J9
    Related
    ENSMUSP00000028113.4, ENSMUST00000028113.10
    Conserved Domains (4) summary
    cd00204
    Location:91 → 216
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:102 → 192
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:67 → 116
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:132 → 160
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    23094769..23157141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017319257.3 → XP_017174746.1  uncharacterized protein LOC70981 isoform X1

    Conserved Domains (2) summary
    PHA02874
    Location:89 → 259
    PHA02874; ankyrin repeat protein; Provisional
    sd00045
    Location:132 → 160
    ANK; ANK repeat [structural motif]

  2. XM_011239180.4 → XP_011237482.1  uncharacterized protein LOC70981 isoform X2

    Conserved Domains (2) summary
    PHA02874
    Location:89 → 268
    PHA02874; ankyrin repeat protein; Provisional
    sd00045
    Location:132 → 160
    ANK; ANK repeat [structural motif]

  3. XM_006498328.5 → XP_006498391.1  uncharacterized protein LOC70981 isoform X3

    Conserved Domains (2) summary
    PHA02874
    Location:89 → 268
    PHA02874; ankyrin repeat protein; Provisional
    sd00045
    Location:132 → 160
    ANK; ANK repeat [structural motif]

RNA

  1. XR_003953719.2 RNA Sequence

  2. XR_004940729.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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