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MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708299, updated on 17-Aug-2024

Summary

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Official Symbol
MGAT5Bprovided by VGNC
Official Full Name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase Bprovided by VGNC
Primary source
VGNC:VGNC:74566
Locus tag
EGK_09024
See related
Ensembl:ENSMMUG00000016300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See MGAT5B in Genome Data Viewer
Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (73253461..73333442)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (70607026..70729856)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene uncharacterized LOC114673192 Neighboring gene small Cajal body-specific RNA 16 Neighboring gene uncharacterized LOC114673193

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
NP_001253315.1
XP_014975829.1
XP_014975830.1
XP_014975831.1
XP_014975832.1
XP_028691388.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266386.1 → NP_001253315.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

    See identical proteins and their annotated locations for NP_001253315.1

    Status: PROVISIONAL

    Source sequence(s)
    JU333067
    UniProtKB/TrEMBL
    F7AHP5, F7GUH0, H9FQB3
    Conserved Domains (1) summary
    pfam15024
    Location:184 → 777
    Glyco_transf_18; Glycosyltransferase family 18

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    73253461..73333442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120344.2 → XP_014975830.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    F7AHP5, F7GUH0
    Related
    ENSMMUP00000034005.3, ENSMMUT00000040976.3
    Conserved Domains (1) summary
    pfam15024
    Location:184 → 775
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_015120345.2 → XP_014975831.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X3

    UniProtKB/TrEMBL
    F7AHN1
    Conserved Domains (1) summary
    pfam15024
    Location:163 → 720
    Glyco_transf_18; Glycosyltransferase family 18

  3. XM_028835555.1 → XP_028691388.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X5

    UniProtKB/TrEMBL
    F7AHP5, F7GUH0
    Conserved Domains (1) summary
    pfam15024
    Location:149 → 694
    Glyco_transf_18; Glycosyltransferase family 18

  4. XM_015120346.2 → XP_014975832.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    F7AHP5, F7GUH0
    Conserved Domains (1) summary
    pfam15024
    Location:121 → 714
    Glyco_transf_18; Glycosyltransferase family 18

  5. XM_015120343.2 → XP_014975829.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    F7AHP5, F7GUH0, G7NGZ1
    Related
    ENSMMUP00000034006.3, ENSMMUT00000040977.3
    Conserved Domains (1) summary
    pfam15024
    Location:195 → 786
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

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